Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcd1Q61466 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.36■□□□□ 0.37
Smarcd1Q61466 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarcd1Q61466 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.35■□□□□ 0.37
Smarcd1Q61466 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.35■□□□□ 0.37
Smarcd1Q61466 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Smarcd1Q61466 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.35■□□□□ 0.37
Smarcd1Q61466 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.35■□□□□ 0.37
Smarcd1Q61466 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.34■□□□□ 0.37
Smarcd1Q61466 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Gm10819-201ENSMUST00000099988 561 ntBASIC17.34■□□□□ 0.37
Smarcd1Q61466 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarcd1Q61466 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Smarcd1Q61466 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Gm27742-201ENSMUST00000184667 60 ntBASIC17.33■□□□□ 0.36
Smarcd1Q61466 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Smarcd1Q61466 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms