Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.48■□□□□ 0.55
Ift88Q61371 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.48■□□□□ 0.55
Ift88Q61371 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Gm12085-201ENSMUST00000119263 940 ntBASIC18.48■□□□□ 0.55
Ift88Q61371 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.48■□□□□ 0.55
Ift88Q61371 Gm10698-201ENSMUST00000182663 604 ntBASIC18.48■□□□□ 0.55
Ift88Q61371 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.48■□□□□ 0.55
Ift88Q61371 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.48■□□□□ 0.55
Ift88Q61371 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ift88Q61371 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ift88Q61371 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Ift88Q61371 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.47■□□□□ 0.55
Ift88Q61371 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ift88Q61371 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ift88Q61371 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Gm7638-201ENSMUST00000121348 967 ntBASIC18.46■□□□□ 0.55
Ift88Q61371 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.46■□□□□ 0.55
Ift88Q61371 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.46■□□□□ 0.55
Ift88Q61371 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ift88Q61371 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ift88Q61371 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ift88Q61371 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ift88Q61371 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ift88Q61371 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ift88Q61371 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.44■□□□□ 0.54
Ift88Q61371 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ift88Q61371 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ift88Q61371 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ift88Q61371 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ift88Q61371 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms