Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.16■□□□□ 0.66
Scnn1aQ61180 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.16■□□□□ 0.66
Scnn1aQ61180 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.16■□□□□ 0.66
Scnn1aQ61180 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.16■□□□□ 0.66
Scnn1aQ61180 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scnn1aQ61180 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scnn1aQ61180 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.15■□□□□ 0.66
Scnn1aQ61180 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.15■□□□□ 0.66
Scnn1aQ61180 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scnn1aQ61180 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scnn1aQ61180 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.14■□□□□ 0.66
Scnn1aQ61180 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.14■□□□□ 0.66
Scnn1aQ61180 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Gm43347-201ENSMUST00000200226 580 ntBASIC19.14■□□□□ 0.65
Scnn1aQ61180 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.14■□□□□ 0.65
Scnn1aQ61180 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scnn1aQ61180 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scnn1aQ61180 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.12■□□□□ 0.65
Scnn1aQ61180 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scnn1aQ61180 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.11■□□□□ 0.65
Scnn1aQ61180 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Gm44454-201ENSMUST00000198541 138 ntBASIC19.11■□□□□ 0.65
Scnn1aQ61180 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scnn1aQ61180 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.1■□□□□ 0.65
Scnn1aQ61180 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms