Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.73■□□□□ 0.91
Irf9Q61179 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.73■□□□□ 0.91
Irf9Q61179 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf9Q61179 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.72■□□□□ 0.91
Irf9Q61179 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Irf9Q61179 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Gm34391-201ENSMUST00000203706 907 ntBASIC20.72■□□□□ 0.91
Irf9Q61179 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.72■□□□□ 0.91
Irf9Q61179 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Irf9Q61179 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Irf9Q61179 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Irf9Q61179 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Irf9Q61179 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Irf9Q61179 Gm24589-201ENSMUST00000116692 94 ntBASIC20.71■□□□□ 0.91
Irf9Q61179 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.71■□□□□ 0.91
Irf9Q61179 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Irf9Q61179 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.71■□□□□ 0.91
Irf9Q61179 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.71■□□□□ 0.91
Irf9Q61179 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf9Q61179 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.7■□□□□ 0.9
Irf9Q61179 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Irf9Q61179 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.7■□□□□ 0.9
Irf9Q61179 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Irf9Q61179 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.7■□□□□ 0.9
Irf9Q61179 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf9Q61179 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.69■□□□□ 0.9
Irf9Q61179 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Gm13312-201ENSMUST00000119631 718 ntBASIC20.69■□□□□ 0.9
Irf9Q61179 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Irf9Q61179 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Irf9Q61179 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Irf9Q61179 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Irf9Q61179 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Irf9Q61179 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Irf9Q61179 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Irf9Q61179 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.67■□□□□ 0.9
Irf9Q61179 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms