Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.45■□□□□ 0.22
Col12a1Q60847 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.45■□□□□ 0.22
Col12a1Q60847 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col12a1Q60847 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm5682-201ENSMUST00000173402 505 ntBASIC16.44■□□□□ 0.22
Col12a1Q60847 Mir6977-201ENSMUST00000184960 64 ntBASIC16.44■□□□□ 0.22
Col12a1Q60847 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm4459-201ENSMUST00000118750 468 ntBASIC16.44■□□□□ 0.22
Col12a1Q60847 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.44■□□□□ 0.22
Col12a1Q60847 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col12a1Q60847 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
Col12a1Q60847 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col12a1Q60847 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.43■□□□□ 0.22
Col12a1Q60847 Gm12497-201ENSMUST00000138778 237 ntBASIC16.43■□□□□ 0.22
Col12a1Q60847 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.43■□□□□ 0.22
Col12a1Q60847 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col12a1Q60847 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.43■□□□□ 0.22
Col12a1Q60847 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Gm12428-201ENSMUST00000119844 727 ntBASIC16.43■□□□□ 0.22
Col12a1Q60847 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.43■□□□□ 0.22
Col12a1Q60847 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col12a1Q60847 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.43■□□□□ 0.22
Col12a1Q60847 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col12a1Q60847 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.42■□□□□ 0.22
Col12a1Q60847 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col12a1Q60847 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.42■□□□□ 0.22
Col12a1Q60847 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col12a1Q60847 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.41■□□□□ 0.22
Col12a1Q60847 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col12a1Q60847 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col12a1Q60847 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col12a1Q60847 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Col12a1Q60847 Gm5312-201ENSMUST00000203728 547 ntBASIC16.41■□□□□ 0.22
Col12a1Q60847 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col12a1Q60847 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Col12a1Q60847 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Gm11424-201ENSMUST00000121929 829 ntBASIC16.4■□□□□ 0.22
Col12a1Q60847 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col12a1Q60847 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms