Protein–RNA interactions for Protein: Q60846

Tnfrsf8, Tumor necrosis factor receptor superfamily member 8, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf8Q60846 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf8Q60846 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf8Q60846 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf8Q60846 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tnfrsf8Q60846 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tnfrsf8Q60846 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Tnfrsf8Q60846 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Gm27742-201ENSMUST00000184667 60 ntBASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Ank2-226ENSMUST00000189368 339 ntBASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Gm10819-201ENSMUST00000099988 561 ntBASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf8Q60846 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf8Q60846 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Tnfrsf8Q60846 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Gm15794-201ENSMUST00000120182 631 ntBASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf8Q60846 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms