Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp13a4Q5XF90 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp13a4Q5XF90 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp13a4Q5XF90 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Gm26039-201ENSMUST00000158152 144 ntBASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atp13a4Q5XF90 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Haglr-201ENSMUST00000100000 2085 ntBASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp13a4Q5XF90 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp13a4Q5XF90 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Gm18032-201ENSMUST00000222541 538 ntBASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp13a4Q5XF90 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18■□□□□ 0.47
Atp13a4Q5XF90 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Gm22697-201ENSMUST00000175194 63 ntBASIC18■□□□□ 0.47
Atp13a4Q5XF90 Gm44450-201ENSMUST00000199528 114 ntBASIC18■□□□□ 0.47
Atp13a4Q5XF90 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Atp13a4Q5XF90 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp13a4Q5XF90 Gm18115-201ENSMUST00000221209 621 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms