Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Gm36967-201ENSMUST00000193814 266 ntBASIC20.2■□□□□ 0.82
Ubr3Q5U430 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr3Q5U430 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.18■□□□□ 0.82
Ubr3Q5U430 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.18■□□□□ 0.82
Ubr3Q5U430 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.18■□□□□ 0.82
Ubr3Q5U430 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.18■□□□□ 0.82
Ubr3Q5U430 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr3Q5U430 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr3Q5U430 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Gm14701-201ENSMUST00000117156 348 ntBASIC20.16■□□□□ 0.82
Ubr3Q5U430 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.16■□□□□ 0.82
Ubr3Q5U430 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr3Q5U430 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.15■□□□□ 0.82
Ubr3Q5U430 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.15■□□□□ 0.82
Ubr3Q5U430 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr3Q5U430 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr3Q5U430 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr3Q5U430 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ubr3Q5U430 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.14■□□□□ 0.82
Ubr3Q5U430 Gm15920-201ENSMUST00000118998 402 ntBASIC20.14■□□□□ 0.81
Ubr3Q5U430 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.14■□□□□ 0.81
Ubr3Q5U430 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr3Q5U430 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ubr3Q5U430 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr3Q5U430 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.14■□□□□ 0.81
Ubr3Q5U430 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr3Q5U430 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.13■□□□□ 0.81
Ubr3Q5U430 Mir6404-201ENSMUST00000183699 94 ntBASIC20.13■□□□□ 0.81
Ubr3Q5U430 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.13■□□□□ 0.81
Ubr3Q5U430 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr3Q5U430 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms