Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom1Q5SX79 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom1Q5SX79 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.73■□□□□ 0.43
Shroom1Q5SX79 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gm13186-201ENSMUST00000118031 316 ntBASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.72■□□□□ 0.43
Shroom1Q5SX79 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Shroom1Q5SX79 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Shroom1Q5SX79 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Shroom1Q5SX79 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Gm15794-201ENSMUST00000120182 631 ntBASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Olfr129-201ENSMUST00000122318 993 ntBASIC17.7■□□□□ 0.42
Shroom1Q5SX79 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom1Q5SX79 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Gm11336-201ENSMUST00000118168 334 ntBASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Gm18115-201ENSMUST00000221209 621 ntBASIC17.69■□□□□ 0.42
Shroom1Q5SX79 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom1Q5SX79 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms