Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tsr1Q5SWD9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Gm43371-201ENSMUST00000202838 1031 ntBASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tsr1Q5SWD9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tsr1Q5SWD9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tsr1Q5SWD9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tsr1Q5SWD9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tsr1Q5SWD9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.88■□□□□ 0.45
Tsr1Q5SWD9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms