Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav7d-4Q5R1H9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-4Q5R1H9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-4Q5R1H9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-4Q5R1H9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-4Q5R1H9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-4Q5R1H9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms