Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-3Q5R1E6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Gm20760-201ENSMUST00000179197 648 ntBASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-3Q5R1E6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-3Q5R1E6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Mir1199-201ENSMUST00000117015 119 ntBASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Gm7791-201ENSMUST00000219066 539 ntBASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-3Q5R1E6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-3Q5R1E6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms