Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col27a1Q5QNQ9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col27a1Q5QNQ9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col27a1Q5QNQ9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col27a1Q5QNQ9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col27a1Q5QNQ9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Gm44492-201ENSMUST00000197012 141 ntBASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.03■□□□□ 0.16
Col27a1Q5QNQ9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.02■□□□□ 0.16
Col27a1Q5QNQ9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms