Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h1Q4VGL6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h1Q4VGL6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h1Q4VGL6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Gm34391-201ENSMUST00000203706 907 ntBASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h1Q4VGL6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h1Q4VGL6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h1Q4VGL6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms