Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shank3Q4ACU6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.75■□□□□ 0.91
Shank3Q4ACU6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank3Q4ACU6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank3Q4ACU6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Gm43438-201ENSMUST00000198133 379 ntBASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Chchd1-203ENSMUST00000224633 557 ntBASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.73■□□□□ 0.91
Shank3Q4ACU6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Gm7222-201ENSMUST00000117512 906 ntBASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Gm36967-201ENSMUST00000193814 266 ntBASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank3Q4ACU6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank3Q4ACU6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Shank3Q4ACU6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shank3Q4ACU6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Gm27646-201ENSMUST00000183989 110 ntBASIC20.7■□□□□ 0.9
Shank3Q4ACU6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank3Q4ACU6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms