Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Rarb-207ENSMUST00000225921 2756 ntBASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Foxr1Q3UTB7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Foxr1Q3UTB7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Foxr1Q3UTB7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Foxr1Q3UTB7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Foxr1Q3UTB7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Foxr1Q3UTB7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxr1Q3UTB7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxr1Q3UTB7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxr1Q3UTB7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Gm12895-201ENSMUST00000122214 226 ntBASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxr1Q3UTB7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms