Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nlrc4Q3UP24 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nlrc4Q3UP24 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nlrc4Q3UP24 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Mir770-201ENSMUST00000103252 94 ntBASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nlrc4Q3UP24 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nlrc4Q3UP24 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms