Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cks1brtQ3UNC9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cks1brtQ3UNC9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cks1brtQ3UNC9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cks1brtQ3UNC9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1brtQ3UNC9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Gm11421-201ENSMUST00000122124 294 ntBASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cks1brtQ3UNC9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms