Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl9Q32KG4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Gm11355-201ENSMUST00000121120 306 ntBASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rtl9Q32KG4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.71■□□□□ 0.42
Rtl9Q32KG4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Gm26039-201ENSMUST00000158152 144 ntBASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Gm29518-201ENSMUST00000190858 372 ntBASIC17.7■□□□□ 0.42
Rtl9Q32KG4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl9Q32KG4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Gm9103-201ENSMUST00000119371 405 ntBASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rtl9Q32KG4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rtl9Q32KG4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms