Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Gm13616-201ENSMUST00000120600 222 ntBASIC12.27□□□□□ -0.45
Hspg2Q05793 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hspg2Q05793 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hspg2Q05793 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Gm13036-201ENSMUST00000117799 748 ntBASIC12.26□□□□□ -0.45
Hspg2Q05793 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.26□□□□□ -0.45
Hspg2Q05793 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hspg2Q05793 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hspg2Q05793 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 AV026068-213ENSMUST00000223675 1171 ntBASIC12.25□□□□□ -0.45
Hspg2Q05793 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.25□□□□□ -0.45
Hspg2Q05793 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hspg2Q05793 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hspg2Q05793 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.25□□□□□ -0.45
Hspg2Q05793 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Hspg2Q05793 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Hspg2Q05793 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hspg2Q05793 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.25□□□□□ -0.45
Hspg2Q05793 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.25□□□□□ -0.45
Hspg2Q05793 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm4535-201ENSMUST00000182274 558 ntBASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.24□□□□□ -0.45
Hspg2Q05793 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm10355-201ENSMUST00000097146 517 ntBASIC12.24□□□□□ -0.45
Hspg2Q05793 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.24□□□□□ -0.45
Hspg2Q05793 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.24□□□□□ -0.45
Hspg2Q05793 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Hspg2Q05793 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.24□□□□□ -0.45
Hspg2Q05793 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hspg2Q05793 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hspg2Q05793 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.24□□□□□ -0.45
Hspg2Q05793 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm14701-201ENSMUST00000117156 348 ntBASIC12.23□□□□□ -0.45
Hspg2Q05793 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.23□□□□□ -0.45
Hspg2Q05793 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hspg2Q05793 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.23□□□□□ -0.45
Hspg2Q05793 Gm7506-201ENSMUST00000207758 815 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms