Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx3-1P97436 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-1P97436 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-1P97436 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.4□□□□□ -0.1
Nkx3-1P97436 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx3-1P97436 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx3-1P97436 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Gm29707-201ENSMUST00000196325 491 ntBASIC14.39□□□□□ -0.11
Nkx3-1P97436 Gm44450-201ENSMUST00000199528 114 ntBASIC14.39□□□□□ -0.11
Nkx3-1P97436 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-1P97436 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.39□□□□□ -0.11
Nkx3-1P97436 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Gm18421-201ENSMUST00000204122 625 ntBASIC14.38□□□□□ -0.11
Nkx3-1P97436 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx3-1P97436 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Gm13884-201ENSMUST00000118103 829 ntBASIC14.37□□□□□ -0.11
Nkx3-1P97436 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-1P97436 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.36□□□□□ -0.11
Nkx3-1P97436 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx3-1P97436 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-1P97436 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-1P97436 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms