Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SgcaP82350 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcaP82350 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SgcaP82350 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcaP82350 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SgcaP82350 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SgcaP82350 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcaP82350 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SgcaP82350 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SgcaP82350 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SgcaP82350 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Gm2399-201ENSMUST00000104944 225 ntBASIC14.01□□□□□ -0.17
SgcaP82350 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Gm13401-201ENSMUST00000117074 291 ntBASIC14.01□□□□□ -0.17
SgcaP82350 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.01□□□□□ -0.17
SgcaP82350 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SgcaP82350 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.01□□□□□ -0.17
SgcaP82350 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.01□□□□□ -0.17
SgcaP82350 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcaP82350 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SgcaP82350 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SgcaP82350 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14□□□□□ -0.17
SgcaP82350 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14□□□□□ -0.17
SgcaP82350 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14□□□□□ -0.17
SgcaP82350 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Gm19721-201ENSMUST00000195284 1764 ntBASIC14□□□□□ -0.17
SgcaP82350 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SgcaP82350 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcaP82350 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14□□□□□ -0.17
SgcaP82350 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
SgcaP82350 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SgcaP82350 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SgcaP82350 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SgcaP82350 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SgcaP82350 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
SgcaP82350 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcaP82350 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms