Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.05■□□□□ 0.32
Ybx1P62960 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ybx1P62960 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ybx1P62960 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ybx1P62960 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ybx1P62960 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.04■□□□□ 0.32
Ybx1P62960 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ybx1P62960 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ybx1P62960 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.04■□□□□ 0.32
Ybx1P62960 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.04■□□□□ 0.32
Ybx1P62960 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.04■□□□□ 0.32
Ybx1P62960 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ybx1P62960 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.03■□□□□ 0.32
Ybx1P62960 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.03■□□□□ 0.32
Ybx1P62960 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.03■□□□□ 0.32
Ybx1P62960 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.03■□□□□ 0.32
Ybx1P62960 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.03■□□□□ 0.32
Ybx1P62960 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ybx1P62960 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ybx1P62960 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ybx1P62960 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.02■□□□□ 0.32
Ybx1P62960 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.02■□□□□ 0.32
Ybx1P62960 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.02■□□□□ 0.32
Ybx1P62960 Gm18733-201ENSMUST00000173950 856 ntBASIC17.02■□□□□ 0.32
Ybx1P62960 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Gm5867-201ENSMUST00000063197 592 ntBASIC17.02■□□□□ 0.32
Ybx1P62960 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ybx1P62960 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ybx1P62960 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.02■□□□□ 0.31
Ybx1P62960 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ybx1P62960 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ybx1P62960 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Gm13312-201ENSMUST00000119631 718 ntBASIC17.01■□□□□ 0.31
Ybx1P62960 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Gm27525-201ENSMUST00000184465 107 ntBASIC17.01■□□□□ 0.31
Ybx1P62960 Gm27867-201ENSMUST00000184778 125 ntBASIC17.01■□□□□ 0.31
Ybx1P62960 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.01■□□□□ 0.31
Ybx1P62960 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.01■□□□□ 0.31
Ybx1P62960 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ybx1P62960 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ybx1P62960 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms