Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.09□□□□□ -0.15
Gabra1P62812 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gabra1P62812 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabra1P62812 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Gabra1P62812 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabra1P62812 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabra1P62812 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabra1P62812 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gabra1P62812 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gabra1P62812 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.08□□□□□ -0.16
Gabra1P62812 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.08□□□□□ -0.16
Gabra1P62812 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.08□□□□□ -0.16
Gabra1P62812 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Gabra1P62812 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gabra1P62812 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Gabra1P62812 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gabra1P62812 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gabra1P62812 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Gabra1P62812 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.07□□□□□ -0.16
Gabra1P62812 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.07□□□□□ -0.16
Gabra1P62812 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gabra1P62812 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Gabra1P62812 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gabra1P62812 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gabra1P62812 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Gabra1P62812 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.06□□□□□ -0.16
Gabra1P62812 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Gabra1P62812 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gabra1P62812 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gabra1P62812 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms