Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Hps5P59438 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.69■□□□□ 0.58
Hps5P59438 Gm24841-201ENSMUST00000158676 357 ntBASIC18.69■□□□□ 0.58
Hps5P59438 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.69■□□□□ 0.58
Hps5P59438 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hps5P59438 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hps5P59438 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps5P59438 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps5P59438 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Hps5P59438 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Gm7063-201ENSMUST00000186840 981 ntBASIC18.68■□□□□ 0.58
Hps5P59438 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps5P59438 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Hps5P59438 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps5P59438 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hps5P59438 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hps5P59438 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.67■□□□□ 0.58
Hps5P59438 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hps5P59438 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps5P59438 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.66■□□□□ 0.58
Hps5P59438 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Hps5P59438 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Gm7638-201ENSMUST00000121348 967 ntBASIC18.66■□□□□ 0.58
Hps5P59438 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.66■□□□□ 0.58
Hps5P59438 Gm6623-201ENSMUST00000173570 544 ntBASIC18.66■□□□□ 0.58
Hps5P59438 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.66■□□□□ 0.58
Hps5P59438 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps5P59438 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Hps5P59438 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hps5P59438 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.65■□□□□ 0.58
Hps5P59438 Gm43347-201ENSMUST00000200226 580 ntBASIC18.65■□□□□ 0.58
Hps5P59438 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hps5P59438 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hps5P59438 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps5P59438 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hps5P59438 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.64■□□□□ 0.57
Hps5P59438 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.64■□□□□ 0.57
Hps5P59438 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps5P59438 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps5P59438 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Hps5P59438 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps5P59438 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hps5P59438 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps5P59438 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms