Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tubgcp3P58854 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.02■□□□□ 0.32
Tubgcp3P58854 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Gm37055-201ENSMUST00000191866 133 ntBASIC17.02■□□□□ 0.32
Tubgcp3P58854 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tubgcp3P58854 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Tubgcp3P58854 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tubgcp3P58854 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tubgcp3P58854 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17■□□□□ 0.31
Tubgcp3P58854 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17■□□□□ 0.31
Tubgcp3P58854 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Tubgcp3P58854 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17■□□□□ 0.31
Tubgcp3P58854 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17■□□□□ 0.31
Tubgcp3P58854 Gm30025-201ENSMUST00000218555 728 ntBASIC17■□□□□ 0.31
Tubgcp3P58854 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17■□□□□ 0.31
Tubgcp3P58854 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tubgcp3P58854 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tubgcp3P58854 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tubgcp3P58854 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.99■□□□□ 0.31
Tubgcp3P58854 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tubgcp3P58854 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms