Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sssca1P56873 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.52□□□□□ -0.25
Sssca1P56873 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.52□□□□□ -0.25
Sssca1P56873 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.52□□□□□ -0.25
Sssca1P56873 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sssca1P56873 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.52□□□□□ -0.25
Sssca1P56873 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sssca1P56873 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.52□□□□□ -0.25
Sssca1P56873 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Dancr-204ENSMUST00000132389 2347 ntBASIC13.52□□□□□ -0.25
Sssca1P56873 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.52□□□□□ -0.25
Sssca1P56873 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sssca1P56873 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Sssca1P56873 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sssca1P56873 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.51□□□□□ -0.25
Sssca1P56873 Gm18025-201ENSMUST00000221733 862 ntBASIC13.51□□□□□ -0.25
Sssca1P56873 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sssca1P56873 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.51□□□□□ -0.25
Sssca1P56873 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.51□□□□□ -0.25
Sssca1P56873 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sssca1P56873 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sssca1P56873 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.5□□□□□ -0.25
Sssca1P56873 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.5□□□□□ -0.25
Sssca1P56873 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sssca1P56873 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.5□□□□□ -0.25
Sssca1P56873 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.5□□□□□ -0.25
Sssca1P56873 Gm42545-201ENSMUST00000202755 922 ntBASIC13.5□□□□□ -0.25
Sssca1P56873 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sssca1P56873 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sssca1P56873 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sssca1P56873 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sssca1P56873 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sssca1P56873 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms