Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.65■□□□□ 0.26
Fdft1P53798 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.65■□□□□ 0.26
Fdft1P53798 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.65■□□□□ 0.26
Fdft1P53798 Mir5122-201ENSMUST00000175004 89 ntBASIC16.65■□□□□ 0.26
Fdft1P53798 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.65■□□□□ 0.26
Fdft1P53798 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.65■□□□□ 0.26
Fdft1P53798 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Fdft1P53798 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fdft1P53798 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.64■□□□□ 0.25
Fdft1P53798 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Fdft1P53798 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.64■□□□□ 0.25
Fdft1P53798 Gm7791-201ENSMUST00000219066 539 ntBASIC16.64■□□□□ 0.25
Fdft1P53798 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.64■□□□□ 0.25
Fdft1P53798 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.64■□□□□ 0.25
Fdft1P53798 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Fdft1P53798 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fdft1P53798 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Il3ra-202ENSMUST00000223589 738 ntBASIC16.63■□□□□ 0.25
Fdft1P53798 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.63■□□□□ 0.25
Fdft1P53798 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Fdft1P53798 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fdft1P53798 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.63■□□□□ 0.25
Fdft1P53798 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Fdft1P53798 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Fdft1P53798 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Fdft1P53798 Gm21814-202ENSMUST00000203277 873 ntBASIC16.62■□□□□ 0.25
Fdft1P53798 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.62■□□□□ 0.25
Fdft1P53798 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Fdft1P53798 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Fdft1P53798 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.62■□□□□ 0.25
Fdft1P53798 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fdft1P53798 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Fdft1P53798 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
Fdft1P53798 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.61■□□□□ 0.25
Fdft1P53798 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fdft1P53798 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.61■□□□□ 0.25
Fdft1P53798 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.61■□□□□ 0.25
Fdft1P53798 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms