Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.94■□□□□ 0.14
Sox3P53784 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Gm11355-201ENSMUST00000121120 306 ntBASIC15.94■□□□□ 0.14
Sox3P53784 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.94■□□□□ 0.14
Sox3P53784 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.94■□□□□ 0.14
Sox3P53784 Gm37935-201ENSMUST00000192012 982 ntBASIC15.94■□□□□ 0.14
Sox3P53784 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.94■□□□□ 0.14
Sox3P53784 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Sox3P53784 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox3P53784 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Sox3P53784 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Sox3P53784 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox3P53784 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Sox3P53784 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
Sox3P53784 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.93■□□□□ 0.14
Sox3P53784 Gm4974-201ENSMUST00000209974 875 ntBASIC15.93■□□□□ 0.14
Sox3P53784 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox3P53784 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Haglr-201ENSMUST00000100000 2085 ntBASIC15.93■□□□□ 0.14
Sox3P53784 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Sox3P53784 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox3P53784 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox3P53784 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Sox3P53784 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox3P53784 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.92■□□□□ 0.14
Sox3P53784 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Gm5864-201ENSMUST00000202263 970 ntBASIC15.92■□□□□ 0.14
Sox3P53784 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sox3P53784 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox3P53784 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.92■□□□□ 0.14
Sox3P53784 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Sox3P53784 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sox3P53784 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox3P53784 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox3P53784 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox3P53784 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox3P53784 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox3P53784 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.91■□□□□ 0.14
Sox3P53784 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox3P53784 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox3P53784 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sox3P53784 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox3P53784 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms