Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nek1P51954 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Nek1P51954 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.6■□□□□ 0.57
Nek1P51954 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.6■□□□□ 0.57
Nek1P51954 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Nek1P51954 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nek1P51954 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.59■□□□□ 0.57
Nek1P51954 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Nek1P51954 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nek1P51954 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.59■□□□□ 0.57
Nek1P51954 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nek1P51954 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nek1P51954 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.59■□□□□ 0.57
Nek1P51954 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nek1P51954 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nek1P51954 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nek1P51954 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nek1P51954 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nek1P51954 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nek1P51954 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Gm12085-201ENSMUST00000119263 940 ntBASIC18.58■□□□□ 0.56
Nek1P51954 Gm9731-201ENSMUST00000209480 747 ntBASIC18.58■□□□□ 0.56
Nek1P51954 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.58■□□□□ 0.56
Nek1P51954 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Nek1P51954 Dancr-204ENSMUST00000132389 2347 ntBASIC18.58■□□□□ 0.56
Nek1P51954 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nek1P51954 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.58■□□□□ 0.56
Nek1P51954 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nek1P51954 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.57■□□□□ 0.56
Nek1P51954 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nek1P51954 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.57■□□□□ 0.56
Nek1P51954 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nek1P51954 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Nek1P51954 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.56■□□□□ 0.56
Nek1P51954 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.56■□□□□ 0.56
Nek1P51954 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nek1P51954 Odf3b-204ENSMUST00000227834 930 ntBASIC18.56■□□□□ 0.56
Nek1P51954 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nek1P51954 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms