Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Brca1P48754 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Brca1P48754 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Brca1P48754 Gm26308-201ENSMUST00000157768 69 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Brca1P48754 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.7■□□□□ 0.58
Brca1P48754 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca1P48754 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca1P48754 Gm36967-201ENSMUST00000193814 266 ntBASIC18.69■□□□□ 0.58
Brca1P48754 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.69■□□□□ 0.58
Brca1P48754 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca1P48754 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca1P48754 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.68■□□□□ 0.58
Brca1P48754 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.68■□□□□ 0.58
Brca1P48754 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
Brca1P48754 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Brca1P48754 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.68■□□□□ 0.58
Brca1P48754 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca1P48754 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Brca1P48754 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Brca1P48754 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.67■□□□□ 0.58
Brca1P48754 Gm15920-201ENSMUST00000118998 402 ntBASIC18.67■□□□□ 0.58
Brca1P48754 Gm11780-201ENSMUST00000136880 516 ntBASIC18.67■□□□□ 0.58
Brca1P48754 Mir3113-201ENSMUST00000175478 76 ntBASIC18.67■□□□□ 0.58
Brca1P48754 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.67■□□□□ 0.58
Brca1P48754 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca1P48754 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Brca1P48754 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Gm14057-201ENSMUST00000120631 482 ntBASIC18.66■□□□□ 0.58
Brca1P48754 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Brca1P48754 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.66■□□□□ 0.58
Brca1P48754 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca1P48754 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Brca1P48754 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.65■□□□□ 0.58
Brca1P48754 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.65■□□□□ 0.58
Brca1P48754 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Brca1P48754 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.65■□□□□ 0.58
Brca1P48754 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brca1P48754 Gm9172-201ENSMUST00000212092 954 ntBASIC18.65■□□□□ 0.58
Brca1P48754 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Brca1P48754 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Brca1P48754 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Brca1P48754 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.64■□□□□ 0.57
Brca1P48754 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.64■□□□□ 0.57
Brca1P48754 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca1P48754 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.64■□□□□ 0.57
Brca1P48754 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.64■□□□□ 0.57
Brca1P48754 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.64■□□□□ 0.57
Brca1P48754 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brca1P48754 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
Brca1P48754 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Brca1P48754 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca1P48754 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca1P48754 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca1P48754 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.63■□□□□ 0.57
Brca1P48754 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brca1P48754 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms