Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx2P48379 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx2P48379 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx2P48379 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx2P48379 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Rfx2P48379 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfx2P48379 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rfx2P48379 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfx2P48379 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rfx2P48379 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Gm9103-201ENSMUST00000119371 405 ntBASIC17.47■□□□□ 0.39
Rfx2P48379 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfx2P48379 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfx2P48379 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.47■□□□□ 0.39
Rfx2P48379 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfx2P48379 Actl10-202ENSMUST00000226583 1501 ntBASIC17.47■□□□□ 0.39
Rfx2P48379 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx2P48379 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Gm13216-201ENSMUST00000117145 591 ntBASIC17.46■□□□□ 0.39
Rfx2P48379 Ank2-226ENSMUST00000189368 339 ntBASIC17.46■□□□□ 0.39
Rfx2P48379 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.46■□□□□ 0.39
Rfx2P48379 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfx2P48379 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.46■□□□□ 0.39
Rfx2P48379 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx2P48379 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfx2P48379 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx2P48379 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx2P48379 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
Rfx2P48379 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Rfx2P48379 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Rfx2P48379 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Gm17808-201ENSMUST00000200859 894 ntBASIC17.45■□□□□ 0.38
Rfx2P48379 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.45■□□□□ 0.38
Rfx2P48379 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Rfx2P48379 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.45■□□□□ 0.38
Rfx2P48379 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx2P48379 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfx2P48379 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfx2P48379 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rfx2P48379 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.44■□□□□ 0.38
Rfx2P48379 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx2P48379 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.44■□□□□ 0.38
Rfx2P48379 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rfx2P48379 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rfx2P48379 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rfx2P48379 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx2P48379 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.43■□□□□ 0.38
Rfx2P48379 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms