Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TgfaP48030 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TgfaP48030 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TgfaP48030 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.46□□□□□ -0.09
TgfaP48030 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TgfaP48030 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TgfaP48030 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TgfaP48030 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TgfaP48030 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TgfaP48030 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TgfaP48030 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TgfaP48030 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.45□□□□□ -0.1
TgfaP48030 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.45□□□□□ -0.1
TgfaP48030 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TgfaP48030 Gm5264-201ENSMUST00000190584 848 ntBASIC14.45□□□□□ -0.1
TgfaP48030 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
TgfaP48030 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TgfaP48030 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TgfaP48030 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TgfaP48030 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TgfaP48030 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Grk6-206ENSMUST00000224995 2971 ntBASIC14.44□□□□□ -0.1
TgfaP48030 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Mir5126-201ENSMUST00000175513 77 ntBASIC14.44□□□□□ -0.1
TgfaP48030 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TgfaP48030 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.44□□□□□ -0.1
TgfaP48030 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TgfaP48030 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TgfaP48030 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TgfaP48030 Gm6736-201ENSMUST00000166583 948 ntBASIC14.43□□□□□ -0.1
TgfaP48030 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.43□□□□□ -0.1
TgfaP48030 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TgfaP48030 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TgfaP48030 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.43□□□□□ -0.1
TgfaP48030 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TgfaP48030 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.42□□□□□ -0.1
TgfaP48030 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TgfaP48030 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TgfaP48030 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TgfaP48030 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.42□□□□□ -0.1
TgfaP48030 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
TgfaP48030 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.42□□□□□ -0.1
TgfaP48030 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.42□□□□□ -0.1
TgfaP48030 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TgfaP48030 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms