Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.95■□□□□ 0.14
Sox18P43680 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Sox18P43680 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.95■□□□□ 0.14
Sox18P43680 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Sox18P43680 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Sox18P43680 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Sox18P43680 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.95■□□□□ 0.14
Sox18P43680 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sox18P43680 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
Sox18P43680 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.94■□□□□ 0.14
Sox18P43680 Gm13312-201ENSMUST00000119631 718 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Sox18P43680 Gm24513-201ENSMUST00000174964 138 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Gm27397-201ENSMUST00000184997 107 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.94■□□□□ 0.14
Sox18P43680 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.94■□□□□ 0.14
Sox18P43680 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.94■□□□□ 0.14
Sox18P43680 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sox18P43680 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sox18P43680 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox18P43680 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.93■□□□□ 0.14
Sox18P43680 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.93■□□□□ 0.14
Sox18P43680 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox18P43680 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.93■□□□□ 0.14
Sox18P43680 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox18P43680 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox18P43680 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.93■□□□□ 0.14
Sox18P43680 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox18P43680 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.92■□□□□ 0.14
Sox18P43680 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.92■□□□□ 0.14
Sox18P43680 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.92■□□□□ 0.14
Sox18P43680 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Sox18P43680 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox18P43680 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Sox18P43680 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox18P43680 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox18P43680 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox18P43680 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms