Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.04□□□□□ -0.16
Mmp9P41245 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Mmp9P41245 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Gm13168-201ENSMUST00000121771 632 ntBASIC14.03□□□□□ -0.16
Mmp9P41245 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Gm38285-201ENSMUST00000192928 922 ntBASIC14.03□□□□□ -0.16
Mmp9P41245 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.03□□□□□ -0.16
Mmp9P41245 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Mmp9P41245 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.03□□□□□ -0.16
Mmp9P41245 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Mmp9P41245 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Mmp9P41245 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.02□□□□□ -0.16
Mmp9P41245 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.02□□□□□ -0.16
Mmp9P41245 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.02□□□□□ -0.16
Mmp9P41245 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Mmp9P41245 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Mmp9P41245 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Mmp9P41245 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Mmp9P41245 Gm6420-201ENSMUST00000193885 723 ntBASIC14.02□□□□□ -0.17
Mmp9P41245 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Mmp9P41245 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Mmp9P41245 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Mmp9P41245 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp9P41245 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp9P41245 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp9P41245 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Mmp9P41245 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14□□□□□ -0.17
Mmp9P41245 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14□□□□□ -0.17
Mmp9P41245 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Gm12527-201ENSMUST00000117967 564 ntBASIC14□□□□□ -0.17
Mmp9P41245 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Mmp9P41245 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14□□□□□ -0.17
Mmp9P41245 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp9P41245 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms