Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sox6P40645 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sox6P40645 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.68■□□□□ 0.1
Sox6P40645 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Sox6P40645 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Gm13401-201ENSMUST00000117074 291 ntBASIC15.68■□□□□ 0.1
Sox6P40645 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox6P40645 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox6P40645 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Sox6P40645 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.68■□□□□ 0.1
Sox6P40645 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.68■□□□□ 0.1
Sox6P40645 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox6P40645 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox6P40645 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Sox6P40645 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.67■□□□□ 0.1
Sox6P40645 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox6P40645 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox6P40645 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.67■□□□□ 0.1
Sox6P40645 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.67■□□□□ 0.1
Sox6P40645 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox6P40645 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox6P40645 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox6P40645 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.66■□□□□ 0.1
Sox6P40645 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Mir1199-201ENSMUST00000117015 119 ntBASIC15.66■□□□□ 0.1
Sox6P40645 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.66■□□□□ 0.1
Sox6P40645 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox6P40645 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sox6P40645 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox6P40645 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sox6P40645 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sox6P40645 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Sox6P40645 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox6P40645 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sox6P40645 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox6P40645 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms