Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Fen1P39749 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Fen1P39749 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Gm11643-201ENSMUST00000119578 864 ntBASIC16.82■□□□□ 0.28
Fen1P39749 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Gm6576-201ENSMUST00000169678 883 ntBASIC16.82■□□□□ 0.28
Fen1P39749 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.82■□□□□ 0.28
Fen1P39749 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Fen1P39749 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Fen1P39749 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fen1P39749 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Fen1P39749 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.81■□□□□ 0.28
Fen1P39749 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.81■□□□□ 0.28
Fen1P39749 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.81■□□□□ 0.28
Fen1P39749 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fen1P39749 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.8■□□□□ 0.28
Fen1P39749 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Fen1P39749 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.8■□□□□ 0.28
Fen1P39749 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fen1P39749 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Mir6349-201ENSMUST00000184059 97 ntBASIC16.8■□□□□ 0.28
Fen1P39749 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.8■□□□□ 0.28
Fen1P39749 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fen1P39749 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
Fen1P39749 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Fen1P39749 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Fen1P39749 Gm4968-201ENSMUST00000071458 858 ntBASIC16.79■□□□□ 0.28
Fen1P39749 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fen1P39749 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Fen1P39749 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fen1P39749 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms