Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cdh4P39038 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.96■□□□□ 0.15
Cdh4P39038 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.96■□□□□ 0.15
Cdh4P39038 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Cdh4P39038 Gm7977-201ENSMUST00000193787 748 ntBASIC15.96■□□□□ 0.15
Cdh4P39038 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdh4P39038 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdh4P39038 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdh4P39038 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cdh4P39038 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdh4P39038 Gm6659-201ENSMUST00000174752 547 ntBASIC15.95■□□□□ 0.14
Cdh4P39038 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdh4P39038 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.95■□□□□ 0.14
Cdh4P39038 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.95■□□□□ 0.14
Cdh4P39038 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh4P39038 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.94■□□□□ 0.14
Cdh4P39038 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.94■□□□□ 0.14
Cdh4P39038 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.94■□□□□ 0.14
Cdh4P39038 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.94■□□□□ 0.14
Cdh4P39038 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh4P39038 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cdh4P39038 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.93■□□□□ 0.14
Cdh4P39038 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Gm13186-201ENSMUST00000118031 316 ntBASIC15.93■□□□□ 0.14
Cdh4P39038 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdh4P39038 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
Cdh4P39038 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.93■□□□□ 0.14
Cdh4P39038 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdh4P39038 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.93■□□□□ 0.14
Cdh4P39038 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdh4P39038 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdh4P39038 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh4P39038 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdh4P39038 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.92■□□□□ 0.14
Cdh4P39038 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms