Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.61■□□□□ 0.25
LdlrP35951 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LdlrP35951 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LdlrP35951 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LdlrP35951 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.6■□□□□ 0.25
LdlrP35951 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.6■□□□□ 0.25
LdlrP35951 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.6■□□□□ 0.25
LdlrP35951 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LdlrP35951 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.6■□□□□ 0.25
LdlrP35951 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LdlrP35951 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LdlrP35951 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.59■□□□□ 0.25
LdlrP35951 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Gm18025-201ENSMUST00000221733 862 ntBASIC16.59■□□□□ 0.25
LdlrP35951 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LdlrP35951 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
LdlrP35951 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LdlrP35951 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LdlrP35951 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
LdlrP35951 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LdlrP35951 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LdlrP35951 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LdlrP35951 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LdlrP35951 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.58■□□□□ 0.24
LdlrP35951 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.58■□□□□ 0.24
LdlrP35951 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LdlrP35951 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LdlrP35951 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LdlrP35951 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LdlrP35951 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LdlrP35951 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.57■□□□□ 0.24
LdlrP35951 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Gm42545-201ENSMUST00000202755 922 ntBASIC16.57■□□□□ 0.24
LdlrP35951 Gm30025-201ENSMUST00000218555 728 ntBASIC16.57■□□□□ 0.24
LdlrP35951 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LdlrP35951 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LdlrP35951 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LdlrP35951 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms