Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.09■□□□□ 0.33
Mmp13P33435 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Mmp13P33435 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Mmp13P33435 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.08■□□□□ 0.33
Mmp13P33435 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Mmp13P33435 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm12085-201ENSMUST00000119263 940 ntBASIC17.08■□□□□ 0.32
Mmp13P33435 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mmp13P33435 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.08■□□□□ 0.32
Mmp13P33435 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Mmp13P33435 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp13P33435 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.07■□□□□ 0.32
Mmp13P33435 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.07■□□□□ 0.32
Mmp13P33435 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mmp13P33435 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Mmp13P33435 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Mmp13P33435 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Odf3b-204ENSMUST00000227834 930 ntBASIC17.06■□□□□ 0.32
Mmp13P33435 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Mmp13P33435 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp13P33435 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Gm21814-202ENSMUST00000203277 873 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms