Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.09■□□□□ 0.33
Mmp13P33435 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Mmp13P33435 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mmp13P33435 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp13P33435 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Mmp13P33435 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.08■□□□□ 0.33
Mmp13P33435 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Mmp13P33435 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp13P33435 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm12085-201ENSMUST00000119263 940 ntBASIC17.08■□□□□ 0.32
Mmp13P33435 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mmp13P33435 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.08■□□□□ 0.32
Mmp13P33435 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp13P33435 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.08■□□□□ 0.32
Mmp13P33435 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp13P33435 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Mmp13P33435 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp13P33435 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.07■□□□□ 0.32
Mmp13P33435 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.07■□□□□ 0.32
Mmp13P33435 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp13P33435 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp13P33435 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mmp13P33435 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Mmp13P33435 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Mmp13P33435 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Odf3b-204ENSMUST00000227834 930 ntBASIC17.06■□□□□ 0.32
Mmp13P33435 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp13P33435 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp13P33435 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Mmp13P33435 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.05■□□□□ 0.32
Mmp13P33435 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mmp13P33435 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp13P33435 Gm21814-202ENSMUST00000203277 873 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms