Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm11452-201ENSMUST00000122376 690 ntBASIC18.87■□□□□ 0.61
Col2a1P28481 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.87■□□□□ 0.61
Col2a1P28481 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col2a1P28481 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col2a1P28481 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col2a1P28481 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col2a1P28481 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col2a1P28481 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col2a1P28481 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.86■□□□□ 0.61
Col2a1P28481 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.86■□□□□ 0.61
Col2a1P28481 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col2a1P28481 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col2a1P28481 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col2a1P28481 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.86■□□□□ 0.61
Col2a1P28481 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col2a1P28481 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col2a1P28481 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Gm18733-201ENSMUST00000173950 856 ntBASIC18.85■□□□□ 0.61
Col2a1P28481 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.85■□□□□ 0.61
Col2a1P28481 Gm9172-201ENSMUST00000212092 954 ntBASIC18.85■□□□□ 0.61
Col2a1P28481 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col2a1P28481 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col2a1P28481 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.85■□□□□ 0.61
Col2a1P28481 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.85■□□□□ 0.61
Col2a1P28481 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col2a1P28481 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col2a1P28481 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col2a1P28481 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.85■□□□□ 0.61
Col2a1P28481 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Col2a1P28481 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Gm25990-201ENSMUST00000102440 86 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.84■□□□□ 0.61
Col2a1P28481 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 AW822252-206ENSMUST00000208904 237 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.84■□□□□ 0.61
Col2a1P28481 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Gm13216-201ENSMUST00000117145 591 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Gm4535-201ENSMUST00000182274 558 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col2a1P28481 Gm7506-201ENSMUST00000207758 815 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Gm6376-201ENSMUST00000209407 580 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
Col2a1P28481 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Gm10355-201ENSMUST00000097146 517 ntBASIC18.84■□□□□ 0.61
Col2a1P28481 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col2a1P28481 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col2a1P28481 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.83■□□□□ 0.61
Col2a1P28481 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.83■□□□□ 0.61
Col2a1P28481 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col2a1P28481 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Col2a1P28481 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Col2a1P28481 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.83■□□□□ 0.6
Col2a1P28481 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Col2a1P28481 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.83■□□□□ 0.6
Col2a1P28481 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.83■□□□□ 0.6
Col2a1P28481 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col2a1P28481 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col2a1P28481 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Col2a1P28481 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.82■□□□□ 0.6
Col2a1P28481 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col2a1P28481 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms