Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Gja8P28236 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.56■□□□□ 0.56
Gja8P28236 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Gja8P28236 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.56■□□□□ 0.56
Gja8P28236 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gja8P28236 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Gja8P28236 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Gm27867-201ENSMUST00000184778 125 ntBASIC18.56■□□□□ 0.56
Gja8P28236 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.56■□□□□ 0.56
Gja8P28236 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gja8P28236 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gja8P28236 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.55■□□□□ 0.56
Gja8P28236 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gja8P28236 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gja8P28236 Gm13186-201ENSMUST00000118031 316 ntBASIC18.55■□□□□ 0.56
Gja8P28236 Gm15165-201ENSMUST00000118140 502 ntBASIC18.55■□□□□ 0.56
Gja8P28236 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.55■□□□□ 0.56
Gja8P28236 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.55■□□□□ 0.56
Gja8P28236 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Gja8P28236 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.55■□□□□ 0.56
Gja8P28236 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Gja8P28236 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.55■□□□□ 0.56
Gja8P28236 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Gja8P28236 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gja8P28236 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gja8P28236 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.54■□□□□ 0.56
Gja8P28236 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Gm24513-201ENSMUST00000174964 138 ntBASIC18.54■□□□□ 0.56
Gja8P28236 Auts2-212ENSMUST00000178555 309 ntBASIC18.54■□□□□ 0.56
Gja8P28236 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.54■□□□□ 0.56
Gja8P28236 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.54■□□□□ 0.56
Gja8P28236 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.54■□□□□ 0.56
Gja8P28236 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.54■□□□□ 0.56
Gja8P28236 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gja8P28236 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.53■□□□□ 0.56
Gja8P28236 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.53■□□□□ 0.56
Gja8P28236 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.53■□□□□ 0.56
Gja8P28236 Gm27397-201ENSMUST00000184997 107 ntBASIC18.53■□□□□ 0.56
Gja8P28236 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.53■□□□□ 0.56
Gja8P28236 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.53■□□□□ 0.56
Gja8P28236 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.53■□□□□ 0.56
Gja8P28236 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.53■□□□□ 0.56
Gja8P28236 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gja8P28236 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gja8P28236 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.53■□□□□ 0.56
Gja8P28236 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.53■□□□□ 0.56
Gja8P28236 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gja8P28236 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gja8P28236 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.52■□□□□ 0.56
Gja8P28236 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gja8P28236 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms