Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nfkb1P25799 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.13■□□□□ 0.33
Nfkb1P25799 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.13■□□□□ 0.33
Nfkb1P25799 Gm44450-201ENSMUST00000199528 114 ntBASIC17.13■□□□□ 0.33
Nfkb1P25799 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.13■□□□□ 0.33
Nfkb1P25799 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.12■□□□□ 0.33
Nfkb1P25799 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.12■□□□□ 0.33
Nfkb1P25799 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nfkb1P25799 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Nfkb1P25799 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nfkb1P25799 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.11■□□□□ 0.33
Nfkb1P25799 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nfkb1P25799 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Nfkb1P25799 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nfkb1P25799 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.1■□□□□ 0.33
Nfkb1P25799 Gm18421-201ENSMUST00000204122 625 ntBASIC17.1■□□□□ 0.33
Nfkb1P25799 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.1■□□□□ 0.33
Nfkb1P25799 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nfkb1P25799 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.1■□□□□ 0.33
Nfkb1P25799 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nfkb1P25799 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nfkb1P25799 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.09■□□□□ 0.33
Nfkb1P25799 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Nfkb1P25799 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.09■□□□□ 0.33
Nfkb1P25799 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nfkb1P25799 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nfkb1P25799 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nfkb1P25799 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.08■□□□□ 0.32
Nfkb1P25799 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.08■□□□□ 0.32
Nfkb1P25799 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Nfkb1P25799 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.08■□□□□ 0.32
Nfkb1P25799 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nfkb1P25799 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nfkb1P25799 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms