Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col8a2P25318 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col8a2P25318 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col8a2P25318 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col8a2P25318 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Gm14859-201ENSMUST00000117752 357 ntBASIC13.92□□□□□ -0.18
Col8a2P25318 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col8a2P25318 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.92□□□□□ -0.18
Col8a2P25318 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.92□□□□□ -0.18
Col8a2P25318 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col8a2P25318 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col8a2P25318 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.91□□□□□ -0.18
Col8a2P25318 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.91□□□□□ -0.18
Col8a2P25318 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col8a2P25318 Gm18421-201ENSMUST00000204122 625 ntBASIC13.91□□□□□ -0.18
Col8a2P25318 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col8a2P25318 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.91□□□□□ -0.18
Col8a2P25318 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col8a2P25318 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.9□□□□□ -0.18
Col8a2P25318 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.9□□□□□ -0.18
Col8a2P25318 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.9□□□□□ -0.18
Col8a2P25318 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Col8a2P25318 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Col8a2P25318 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.9□□□□□ -0.18
Col8a2P25318 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.9□□□□□ -0.18
Col8a2P25318 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col8a2P25318 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col8a2P25318 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col8a2P25318 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col8a2P25318 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col8a2P25318 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col8a2P25318 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.89□□□□□ -0.19
Col8a2P25318 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col8a2P25318 Gm15794-201ENSMUST00000120182 631 ntBASIC13.89□□□□□ -0.19
Col8a2P25318 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.89□□□□□ -0.19
Col8a2P25318 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col8a2P25318 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.89□□□□□ -0.19
Col8a2P25318 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms