Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RarbP22605 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RarbP22605 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RarbP22605 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Gm1401-201ENSMUST00000122048 772 ntBASIC18.41■□□□□ 0.54
RarbP22605 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Mir5131-201ENSMUST00000175426 93 ntBASIC18.41■□□□□ 0.54
RarbP22605 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.41■□□□□ 0.54
RarbP22605 Gm44454-201ENSMUST00000198541 138 ntBASIC18.41■□□□□ 0.54
RarbP22605 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.41■□□□□ 0.54
RarbP22605 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.41■□□□□ 0.54
RarbP22605 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.41■□□□□ 0.54
RarbP22605 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RarbP22605 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.41■□□□□ 0.54
RarbP22605 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.41■□□□□ 0.54
RarbP22605 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RarbP22605 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RarbP22605 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RarbP22605 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RarbP22605 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.4■□□□□ 0.54
RarbP22605 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RarbP22605 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RarbP22605 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RarbP22605 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RarbP22605 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RarbP22605 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.39■□□□□ 0.53
RarbP22605 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.39■□□□□ 0.53
RarbP22605 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RarbP22605 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RarbP22605 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.38■□□□□ 0.53
RarbP22605 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.38■□□□□ 0.53
RarbP22605 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
RarbP22605 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RarbP22605 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Gm44357-201ENSMUST00000195897 142 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm19658-201ENSMUST00000196231 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44367-201ENSMUST00000196836 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44350-201ENSMUST00000197197 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44390-201ENSMUST00000197533 144 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44313-201ENSMUST00000198018 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44486-201ENSMUST00000198508 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44314-201ENSMUST00000199263 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44394-201ENSMUST00000199558 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44484-201ENSMUST00000199873 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44466-201ENSMUST00000200264 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Gm44359-201ENSMUST00000200671 138 ntBASIC18.38■□□□□ 0.53
RarbP22605 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RarbP22605 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms