Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Sdc1P18828 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Gm13146-201ENSMUST00000118508 780 ntBASIC13.76□□□□□ -0.21
Sdc1P18828 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.76□□□□□ -0.21
Sdc1P18828 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sdc1P18828 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sdc1P18828 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sdc1P18828 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.75□□□□□ -0.21
Sdc1P18828 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.75□□□□□ -0.21
Sdc1P18828 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.75□□□□□ -0.21
Sdc1P18828 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.75□□□□□ -0.21
Sdc1P18828 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sdc1P18828 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Sdc1P18828 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.75□□□□□ -0.21
Sdc1P18828 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sdc1P18828 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sdc1P18828 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.74□□□□□ -0.21
Sdc1P18828 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.74□□□□□ -0.21
Sdc1P18828 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sdc1P18828 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.74□□□□□ -0.21
Sdc1P18828 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Sdc1P18828 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sdc1P18828 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Sdc1P18828 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.73□□□□□ -0.21
Sdc1P18828 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sdc1P18828 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sdc1P18828 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Sdc1P18828 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sdc1P18828 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.73□□□□□ -0.21
Sdc1P18828 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sdc1P18828 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sdc1P18828 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms