Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.53■□□□□ 0.4
Cd44P15379 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cd44P15379 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.53■□□□□ 0.4
Cd44P15379 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Cd44P15379 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd44P15379 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cd44P15379 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.52■□□□□ 0.4
Cd44P15379 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cd44P15379 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.52■□□□□ 0.4
Cd44P15379 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd44P15379 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd44P15379 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd44P15379 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd44P15379 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd44P15379 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.52■□□□□ 0.39
Cd44P15379 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cd44P15379 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Cd44P15379 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.51■□□□□ 0.39
Cd44P15379 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.51■□□□□ 0.39
Cd44P15379 Gm7791-201ENSMUST00000219066 539 ntBASIC17.51■□□□□ 0.39
Cd44P15379 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Cd44P15379 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd44P15379 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cd44P15379 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cd44P15379 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd44P15379 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cd44P15379 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.5■□□□□ 0.39
Cd44P15379 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.5■□□□□ 0.39
Cd44P15379 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd44P15379 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd44P15379 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd44P15379 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 Gm10653-202ENSMUST00000139570 835 ntBASIC17.49■□□□□ 0.39
Cd44P15379 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.49■□□□□ 0.39
Cd44P15379 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd44P15379 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cd44P15379 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd44P15379 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd44P15379 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Cd44P15379 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.48■□□□□ 0.39
Cd44P15379 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.48■□□□□ 0.39
Cd44P15379 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.48■□□□□ 0.39
Cd44P15379 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.48■□□□□ 0.39
Cd44P15379 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd44P15379 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms