Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ccl1P10146 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccl1P10146 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl1P10146 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.02□□□□□ -0.33
Ccl1P10146 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccl1P10146 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl1P10146 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl1P10146 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl1P10146 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl1P10146 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccl1P10146 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.01□□□□□ -0.33
Ccl1P10146 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccl1P10146 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ccl1P10146 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl1P10146 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccl1P10146 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccl1P10146 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13□□□□□ -0.33
Ccl1P10146 Gm19721-201ENSMUST00000195284 1764 ntBASIC13□□□□□ -0.33
Ccl1P10146 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13□□□□□ -0.33
Ccl1P10146 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ccl1P10146 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccl1P10146 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl1P10146 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.99□□□□□ -0.33
Ccl1P10146 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ccl1P10146 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccl1P10146 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl1P10146 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms