Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Gm4535-201ENSMUST00000182274 558 ntBASIC17.76■□□□□ 0.43
Hoxc8P09025 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc8P09025 Gm10355-201ENSMUST00000097146 517 ntBASIC17.76■□□□□ 0.43
Hoxc8P09025 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hoxc8P09025 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc8P09025 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc8P09025 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc8P09025 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxc8P09025 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxc8P09025 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Gm7230-201ENSMUST00000173026 815 ntBASIC17.75■□□□□ 0.43
Hoxc8P09025 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.75■□□□□ 0.43
Hoxc8P09025 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.75■□□□□ 0.43
Hoxc8P09025 Gm5867-201ENSMUST00000063197 592 ntBASIC17.75■□□□□ 0.43
Hoxc8P09025 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxc8P09025 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc8P09025 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Gm13418-201ENSMUST00000119097 944 ntBASIC17.74■□□□□ 0.43
Hoxc8P09025 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.74■□□□□ 0.43
Hoxc8P09025 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.74■□□□□ 0.43
Hoxc8P09025 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hoxc8P09025 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hoxc8P09025 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxc8P09025 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc8P09025 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hoxc8P09025 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc8P09025 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.72■□□□□ 0.43
Hoxc8P09025 Gm12497-201ENSMUST00000138778 237 ntBASIC17.72■□□□□ 0.43
Hoxc8P09025 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxc8P09025 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc8P09025 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.72■□□□□ 0.43
Hoxc8P09025 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.72■□□□□ 0.43
Hoxc8P09025 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc8P09025 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Hoxc8P09025 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc8P09025 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc8P09025 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Hoxc8P09025 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc8P09025 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.71■□□□□ 0.43
Hoxc8P09025 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.71■□□□□ 0.43
Hoxc8P09025 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.71■□□□□ 0.43
Hoxc8P09025 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc8P09025 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc8P09025 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms