Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Gm11780-201ENSMUST00000136880 516 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Gm36967-201ENSMUST00000193814 266 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a1P02463 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.45■□□□□ 0.86
Col4a1P02463 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.44■□□□□ 0.86
Col4a1P02463 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a1P02463 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col4a1P02463 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a1P02463 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.44■□□□□ 0.86
Col4a1P02463 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a1P02463 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a1P02463 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.44■□□□□ 0.86
Col4a1P02463 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a1P02463 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Col4a1P02463 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.43■□□□□ 0.86
Col4a1P02463 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.43■□□□□ 0.86
Col4a1P02463 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.43■□□□□ 0.86
Col4a1P02463 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.43■□□□□ 0.86
Col4a1P02463 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a1P02463 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Col4a1P02463 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.42■□□□□ 0.86
Col4a1P02463 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Col4a1P02463 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.42■□□□□ 0.86
Col4a1P02463 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col4a1P02463 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Col4a1P02463 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col4a1P02463 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.42■□□□□ 0.86
Col4a1P02463 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.42■□□□□ 0.86
Col4a1P02463 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.42■□□□□ 0.86
Col4a1P02463 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a1P02463 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Col4a1P02463 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.41■□□□□ 0.86
Col4a1P02463 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Col4a1P02463 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a1P02463 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Col4a1P02463 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col4a1P02463 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a1P02463 Gm25406-201ENSMUST00000157599 105 ntBASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms